Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854074.1_cds_XP_016512441.1_25083
CDS Infomation

[gene=LOC107829500] [db_xref=GeneID:107829500] [protein=proline-rich receptor-like protein kinase PERK3 isoform X4] [protein_id=XP_016512441.1] [location=complement(join(66699..66833,67016..67340,67555..67631,67871..68031,68152..69179,69611..69648))] [gbkey=CDS]
Sequence

ATGCAGTCAGCTGGGTCATTTTGGACAAGTAATAGCATAAAATTGAAGTTAGAGCTTAAG
CATTGCATGGAAGAACTTCGTTGCAACATTGTAGTGATGAAGGGTTCCAAACCGAAAGTT
CTCAGGCTAAATCTAGGATGTTCGGAGGAACTTCAAACCCCTTTCTTTTCTGCTAATTCC
TCTCCTGTTAAGGATAGTAGAGAAATACAGGATGAAAGAATGAAGCATTCTACTCCAGTG
AGCAGTCCCGAGGATCAAAGAACATCCTATATGAGAACTCCATTACTGAATTCATTGACT
GATCCAGACACGTTCCTCCTATATGAGCGGAATCCCCTGTATGAAGGGTTCAGTAGAGAA
ACATTTTCACCGGTCCACAAGCAAAGTGTGTGCGATCATGTAAATGATCTGCACTCATTT
GGGGAAAGGATAATAACTCTGTCAACAGTTCCTAAATCTCAAAGTCATACTCATAAAACA
ATCCTTTGGATTCAGCAAAACCATATTATTGCTGACAACAATTCAGCTGTAGAAAACTGC
AAAATTACCTCACGTTCTGTCACTTCTGGAAATAAACATGAGAATTCTATTGAATACAAC
CAAAACCTGAATACCCAAGGAAGCAAGTTCAATCGAGACACTGACAGGGACTATCTTAAC
TCTAGCATCAGAGAAGCAGTCTCTTTAGGTCGAACTTCCTCGATACCTCTTCCTCTATGT
TCATTCTGTCAATGTAAAGCACCTTCTTTTGGAAAGCCTCCAAAACAATTTCGCTATGAA
GAGCTAGAGGAAGCAACAAATGGATTCTCAGGCACAAATTTTCTAGCAGAAGGTGGATTT
GGTCTGGTTCATAAAGGGGTTTTAAGGGATGGAGTGGTTGTTGCAGTAAAACAGCTAAAA
TTTATTGGATCTCAAGCAGACGCTGATTTTCGTAGAGAAGTTCGAGTTTTGAGCTGTGCC
CAGCACAGGAATGTTGTGCTGCTGGTTGGTTACTGCATTCAGGGAAATAGGAGACTATTA
GTATATGAGTTTATTTGCAACAAGTCCTTGGACTTTCATTTGCATGGAACGAAGGAAACA
GCTCTAGATTGGAGCTCACGCCTTAAGATAGCTATTGGGACAGCAAGAGGCTTACGTTAC
CTTCATGAAGATTGCAGAGTGGGATGTATAGTTCACAGAGATCTCAGACCTAAAAACATT
CTCTTAACTCACGACTTTGAACCTTTGGTTGCTGATTTTGGGCTTGCACGATTGTACAAT
GAATGTGAAGCTTCTGAAGATGAACATCTGATTAGAACTTCAAGGTATCTTGCCCCAGAG
TACTCCAATGATGGAAAAGTCACGGAGAAGGTTGATGTATATGCTTTTGGCCTGGTGGTA
TTGGAGTTGATTACTGGTAGAAGAACCAATGACTTGCAATGCTACAGAAGTCAGCACCTT
CTTGCAGGAAGCCTTTCCCCTACTGCTGGAAATGGACCATATCATCTTTCAGCATTCAAA
AATCAGTTGCTGGACTCCAACTTGACCTCATCCCCGCTTGAAAACTTTCCTTATGAACTA
CAGGCGATGAGTCATGCTGCTTTTATGTGTCTACAGGAAGATCCTCAGCTGCGACCTCCA
ATTTCAAAGGTACTTAAAATACTAGAAGGAGGTGGTGCCATTTTTGACTCAAATTCATTT
GGCAGTAGAAGTGGTTACATGCAGGGATCGAATTTTAATAACCATCCTGTATCAAAGAGA
CATTCTCGCAGGCTCTCTTATTAA

Peptide Sequence

PEP ID

XP_016512441.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X4 [Nicotiana tabacum]
Sequence

MQSAGSFWTSNSIKLKLELKHCMEELRCNIVVMKGSKPKVLRLNLGCSEELQTPFFSANS
SPVKDSREIQDERMKHSTPVSSPEDQRTSYMRTPLLNSLTDPDTFLLYERNPLYEGFSRE
TFSPVHKQSVCDHVNDLHSFGERIITLSTVPKSQSHTHKTILWIQQNHIIADNNSAVENC
KITSRSVTSGNKHENSIEYNQNLNTQGSKFNRDTDRDYLNSSIREAVSLGRTSSIPLPLC
SFCQCKAPSFGKPPKQFRYEELEEATNGFSGTNFLAEGGFGLVHKGVLRDGVVVAVKQLK
FIGSQADADFRREVRVLSCAQHRNVVLLVGYCIQGNRRLLVYEFICNKSLDFHLHGTKET
ALDWSSRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARLYN
ECEASEDEHLIRTSRYLAPEYSNDGKVTEKVDVYAFGLVVLELITGRRTNDLQCYRSQHL
LAGSLSPTAGNGPYHLSAFKNQLLDSNLTSSPLENFPYELQAMSHAAFMCLQEDPQLRPP
ISKVLKILEGGGAIFDSNSFGSRSGYMQGSNFNNHPVSKRHSRRLSY

Transcript Sequence

Gene sequence data has not been registered.